Research
I began working on my Ph.D. in September 2020 in the theoretical computational biology lab at the University of Montreal, supervised by Nadia El-Mabrouk. My work is on the design of algorithmic methods for reconstructing the evolutionary history of conserved genomic segments called syntenies.
Papers
See also profiles on: ORCID · dblp · Google Scholar
- , Synesth: Comprehensive syntenic reconciliation with unsampled lineages, Algorithms 17, 5, .
- , Reconciliation with segmental duplication, transfer, loss and gain, Proceedings of the RECOMB-CG 2022 conference, .
- , Evolution through segmental duplications and losses: a super-reconciliation approach, Algorithms Mol. Biol. 15, 1, .
- , Reconstructing the history of syntenies through super-reconciliation, Proceedings of the RECOMB-CG 2018 conference, .
Talks
- Synesth: Comprehensive syntenic reconciliation with unsampled lineages, QfO 2024, Montréal, Canada, . Slides
- Polymorphic, verifiable and efficient dynamic programming, MiDiro, University of Montreal, . Slides
- Inferring scenarios for gene synteny–species coevolution through segmental duplications, transfers, cuts, gains and losses, ISMB 2023, Lyon, France, . Slides Recording Poster
- Reconstructing the evolutionary history of synteny-organized gene families, Ph.D. research project presentation, University of Montreal, . Slides
- Reconciliation with segmental duplication, transfer, loss and gain, RECOMB-CG 2022, La Jolla, California, . Slides Poster
- Quantum algorithms for pattern matching, Quantum information course (IFT6155), University of Montreal, . Slides
- Crochemore–Landau–Ziv’s algorithm: global and local alignment in sub-quadratic time, Computational biology course (IFT6291), University of Montreal, . Slides